RIKEN Center for Biosystems Dynamics Research, Laboratory for Morphogenetic Signaling (Hayashi Lab.)



ImageJ Plugins

Original ImageJ’s plugins have been developed to assist live imaging and image quantification. Please try them by downloading jar files from the following links and place in the ImageJ’s plugin folder of your computer.

*Please note that the plugins were checked in our working environment only (MacOSX, ImageJ java 1.8.0_60 build or later). If you notice any problem in the plugins please let us know. We will try to fix any problem you might encounter.

The user shall be responsible for any losses that may occur through the use of these plugins.

Downloadable list 

Pending list

*There are broken links due to sequential release schedule

  • PeakConnectorFX
  • SegmentMeasure : Measure a part of the length of the selected ROI
  • SaveWebM : Create a WebM type of movie
  • ZRangeSelector : Create a Z-projected image with the Z axis range arbitrarily selected for each timepoint
  • ZahyoHyper : Record and measure the average brightness of the area where clicked the coordinates with the voluntary size ROI
  • AutoEnhance : Create a stack image that multiplies the ratio calculated from the average brightness of the first image
  • LutSelector : Selectable panel for LUT